Update for compatibility with Python 3.12 and Radare 6.0.2

Tested with the following workflows:
vtable diff
deep trace -> vtable alignment

requirements.txt

@@ -1,17 +1,14 @@
-black==22.12.0
-click==8.1.3
+black==25.1.0
+click==8.2.1
 colorama==0.4.6
-Levenshtein==0.20.9
-mypy-extensions==0.4.3
-numpy==1.24.1
-pathspec==0.10.3
-platformdirs==2.6.2
-python-Levenshtein==0.20.9
-r2pipe==1.7.4
-rapidfuzz==2.13.7
-semver==3.0.1
-tomli==2.0.1
--f https://download.pytorch.org/whl/torch_stable.html
-torch==1.13.1+cu117
-tqdm==4.64.1
-typing_extensions==4.4.0
+mypy-extensions==1.1.0
+numpy==2.3.2
+pathspec==0.12.1
+platformdirs==4.4.0
+r2pipe==1.9.6
+rapidfuzz==3.14.0
+semver==3.0.4
+-f https://download.pytorch.org/whl/cu129
+torch==2.8.0
+tqdm==4.67.1
+typing_extensions==4.15.0